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The two-year clock on GST refunds: how the relevant date works

Every refund period has its own deadline. Knowing when each clock starts is the difference between a refund and a rejection.

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Ashish KumarManaging Partner
06 September 20266 min read
Container port from above

For exporters, the refund clock often starts when the ship sails.

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Key takeaways

  • Most GST refunds must be filed within two years of the "relevant date".
  • The relevant date differs by refund type: shipment date for exported goods, payment date for many services, the return due date for inverted duty.
  • Track the clock claim period by claim period, not once a year.

Section 54 of the CGST Act gives a company two years to apply for most refunds. The difficulty is not the two years. It is knowing when they started, because the starting point, the relevant date, changes with the type of refund.

When the two-year clock starts

Refund typeRelevant date (simplified)
Export of goods by sea or airDate the ship or aircraft leaves India
Export of goods by landDate the goods pass the frontier
Export of servicesDate of receipt of payment in foreign exchange, or the invoice date if payment came first
Inverted duty structureDue date for filing the return for the period in which the credit accumulated
Deemed exportsDate the return relating to the deemed exports is filed
Tax paid under the wrong headDate the correct tax was paid

Source: CGST Act, section 54, Explanation 2 (simplified). Check the full text for your facts.

Why claims miss the limit

Refunds are often filed in batches, when someone has time. By then the oldest periods in the batch can be past two years. A deficiency memo adds risk: if a claim comes back and has to be filed again, the new filing still has to fall inside the limit.

In practiceSort your unfiled refund periods by relevant date, oldest first. Anything within six months of the limit should be filed this month.

What to do now

  1. List every period

    Include exports, inverted duty and any tax paid under the wrong head.

  2. Work out each relevant date

    Use the table above as a start, then confirm against the law.

  3. File the oldest first

    Complete claims avoid deficiency memos that eat into the time left.

  4. Track interest too

    Refunds paid late after 60 days earn interest under section 56.

Our GST Refund Recovery practice tracks the clock for every period. Talk to us if older periods are still open.

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About the authorAshish Kumar

Managing Partner of TraCarta. He started the firm in 2018 to recover airline GST credit for corporate clients and leads its three recovery practices.

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General information only, not tax advice. Check the current law and your facts before acting.

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